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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13440326_13443570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13440326 - 13443570

Intron Length:

3245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

QWIEGDEMHLEIRVCGVKCK

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.2

0.75

0.7

77.2

31.5

Minor 5ss

38.4

-1.3

45.7

43.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

RBP1

Ensembl Gene ID:

ENSAPLG00000002750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002781

13440102 - 13457638

17537