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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1344097_1346420_F

Intron Information:

Intron Rank:

139908

Intron Class:

major

Intron Phase:

Intron Coordinates:

1344097 - 1346420

Intron Length:

2324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGGATA

5'SS Class:

major

3'SS Sequence:

TCCACCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TTTCTCTCCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

71.4

40.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

68.9

0.42

64.6

36.3

Minor 5ss

34.6

-1.8

3.5

44.4

45.6

Minor BPS

53.1

0.08

71.76

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026492

1343896 - 1347893

3998