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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13477556_13479782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13477556 - 13479782

Intron Length:

2227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTTTCATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

100

1.24

0.5

100

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

54.1

0.21

1.8

75.13

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046572

13458837 - 13483147

24311

ENSAPLT00000030082

13463303 - 13489561

26259

ENSAPLT00000002722

13460452 - 13500393

39942