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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13888230_13892223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13888230 - 13892223

Intron Length:

3994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

GCATCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTATGC

Flanking Amino Acid:

YSEKSLQKLCGASSGAIDLL

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

73.1

0.52

65.8

39.7

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

49.6

-0

2.1

67.18

44.4

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941

ENSAPLT00000023766

13746940 - 13948452

201513

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258