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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13892870_13923766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13892870 - 13923766

Intron Length:

30897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTCTCTTGCATT

Flanking Amino Acid:

PAEFHWKLDQICDKEWHYYV

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

86.9

0.83

0.7

84.6

30.4

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

0.21

1.9

76.06

41.4

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023766

13746940 - 13948452

201513

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941