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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13935008_13938480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13935008 - 13938480

Intron Length:

3473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

GCATTTCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

GGTACCTTAAAT

Flanking Amino Acid:

SLESLGQGIKYHFNPSQSVL

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

70.9

0.47

0.9

39.7

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

70.1

0.71

1.5

80.43

40.3

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941

ENSAPLT00000023766

13746940 - 13948452

201513