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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13938630_13940028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13938630 - 13940028

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

ATGTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

AGTTAATGAATA

Flanking Amino Acid:

VRRLKVSSTVQCFGEDICIS

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.8

0.69

0.9

77.6

40.7

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

48.3

-0.1

1.8

62.36

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023766

13746940 - 13948452

201513

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941