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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13940253_13943219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13940253 - 13943219

Intron Length:

2967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTGGA

5'SS Class:

major

3'SS Sequence:

TATGTGTTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

TATGTGTTCACA

Flanking Amino Acid:

HPVDLKENDGVKKPVELEEV

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

66.2

39.4

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

75.1

0.56

68.4

41.9

Minor 5ss

34.5

-1.8

2.9

41.6

44.9

Minor BPS

45.7

-0.3

2.4

63.38

43.3

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941

ENSAPLT00000023766

13746940 - 13948452

201513

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258