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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13943391_13944005_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13943391 - 13944005

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GCCACCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TATTTCTTCACT

Flanking Amino Acid:

TNSTAGYSIYGVDSMHNYEL

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

73.2

38.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.5

0.39

0.9

62.1

38.4

Minor 5ss

50.3

0.01

2.4

63.2

42.8

Minor BPS

72.8

0.8

1.7

88.69

36.1

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941

ENSAPLT00000023766

13746940 - 13948452

201513