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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13945662_13947277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13945662 - 13947277

Intron Length:

1616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TGCTTTTCCACT

Flanking Amino Acid:

EGSISTVHNSVVPSVATIVI

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

87.6

0.85

0.8

80.3

37.3

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

48.1

-0

1.9

67.87

43.5

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941

ENSAPLT00000023766

13746940 - 13948452

201513

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258