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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13947463_13948242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13947463 - 13948242

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATCAC

5'SS Class:

major

3'SS Sequence:

GAATATGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

ATTTCTTTGAAT

Flanking Amino Acid:

ALTITVNPMEKYEKPHQAEE

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

65.8

40.2

Major BPS

74.6

0.61

1.4

34.5

Major PPT

66.2

0.36

1.1

57.5

46.8

Minor 5ss

32.8

-2

3.2

43.8

43.9

Minor BPS

73.3

0.81

1.3

86.48

32.6

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023766

13746940 - 13948452

201513

ENSAPLT00000020951

13718095 - 13948452

230358

ENSAPLT00000046632

13732195 - 13948452

216258

ENSAPLT00000020868

13749447 - 13949202

199756

ENSAPLT00000035984

13690304 - 13962096

271793

ENSAPLT00000004717

13604679 - 13948452

343774

ENSAPLT00000033007

13635512 - 13948452

312941