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Intron Name: Anas_platyrhynchos_platyrhynchos_9_13948410_13961939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13948410 - 13961939

Intron Length:

13530

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CCTGTCCTAATT

Flanking Amino Acid:

VQKGDKQNATRRNLASRCMC

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.9

79.7

31.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

74.5

0.55

0.9

68.9

36.2

Minor 5ss

20.4

-3.4

3.9

30.4

42.9

Minor BPS

50.7

0.1

1.8

67.26

44.4

Associated Gene:

Gene:

CLSTN2

Ensembl Gene ID:

ENSAPLG00000004577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035984

13690304 - 13962096

271793