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Intron Name: Anas_platyrhynchos_platyrhynchos_9_14280487_14291535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

14280487 - 14291535

Intron Length:

11049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TGTGCTTTGAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

74.8

0.62

39.8

Major PPT

0.81

0.8

79.9

37.7

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

58.4

0.26

1.5

67.92

38.4

Associated Gene:

Gene:

SPSB4

Ensembl Gene ID:

ENSAPLG00000009878

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044346

14180198 - 14291605

111408