Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14328618_14328807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14328618 - 14328807

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCTCC

5'SS Class:

major

3'SS Sequence:

TGCTGTCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

TTGCCCTGAGCA

Flanking Amino Acid:

DGVCAHVHCLFPAQGLYQRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.6

36.2

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

78.5

0.64

0.9

69.2

41.8

Minor 5ss

39.8

-1.1

2.9

48.2

42.1

Minor BPS

57.3

0.22

1.7

70.23

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033835

14328274 - 14332907

4634