Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14364417_14366057_R

Intron Information:

Intron Rank:

139684

Intron Class:

major

Intron Phase:

Intron Coordinates:

14364417 - 14366057

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAA

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

ATTGCATGGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.4

36.8

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

89.6

0.89

0.7

87.9

29.4

Minor 5ss

34.3

-1.8

3.5

46.3

Minor BPS

45.4

-0.3

1.9

59.95

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028047

14352837 - 14375504

22668