Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14366167_14375181_R

Intron Information:

Intron Rank:

139685

Intron Class:

major

Intron Phase:

Intron Coordinates:

14366167 - 14375181

Intron Length:

9015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TGGGTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AAAAAATTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

71.3

0.48

66.8

43.8

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

46.4

-0.1

1.8

61.92

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028047

14352837 - 14375504

22668