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Intron Name: Anas_platyrhynchos_platyrhynchos_9_14496518_14512225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14496518 - 14512225

Intron Length:

15708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TGTCTTAAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TCTGTCTTAAAA

Flanking Amino Acid:

LAFLSLSLQFYENSRSLFSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

77.8

0.69

78.2

31.8

Major PPT

67.7

0.4

63.5

40.9

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

65.4

0.48

1.5

71.75

40.6

Associated Gene:

Gene:

PXYLP1

Ensembl Gene ID:

ENSAPLG00000004284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030771

14473633 - 14533252

59620

ENSAPLT00000020490

14470813 - 14533252

62440