Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14534788_14535087_R

Intron Information:

Intron Rank:

131781

Intron Class:

major

Intron Phase:

Intron Coordinates:

14534788 - 14535087

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACTC

5'SS Class:

major

3'SS Sequence:

TGTTTCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTGATGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.9

41.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.1

0.75

0.8

81.4

30.6

Minor 5ss

42.1

-0.9

3.2

59.9

44.7

Minor BPS

46.1

-0.2

2.3

71.44

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020854

14534647 - 14538459

3813