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Intron Name: Anas_platyrhynchos_platyrhynchos_9_14557913_14558234_F

Intron Information:

Intron Rank:

132809

Intron Class:

major

Intron Phase:

Intron Coordinates:

14557913 - 14558234

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTATTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TGACAATGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

82.8

0.74

0.8

77.5

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

45.7

-0.2

1.8

63.16

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044484

14544880 - 14559145

14266