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Intron Name: Anas_platyrhynchos_platyrhynchos_9_146110_172007_F

Intron Information:

Intron Rank:

125624

Intron Class:

major

Intron Phase:

Intron Coordinates:

146110 - 172007

Intron Length:

25898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGATTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

56.6

0.29

1.2

68.59

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048442

146033 - 174378

28346