Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14704997_14729744_F

Intron Information:

Intron Rank:

144570

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14704997 - 14729744

Intron Length:

24748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

79.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.4

0.19

1.8

73.1

42.1

Minor 5ss

43.1

-0.8

3.4

65.3

45.9

Minor BPS

56.4

0.28

82.33

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043507

14642965 - 14735367

92403

ENSAPLT00000042912

14704806 - 14731661

26856