About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14729827_14734577_F


Intron Information:

Intron Rank:
144569

Intron Class:
major

Intron Phase:

Intron Coordinates:
14729827 - 14734577

Intron Length:
4751

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTAAGT

5'SS Class:
major

3'SS Sequence:
CCATCCTTGACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAA

U12 Branch Point Sequence:
TTGTTTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
70
40.1

Major BPS
87.2
0.92
0.8
77.7
37.1

Major PPT
68.7
0.42
1
64.1
36.5

Minor 5ss
41.4
-1
2.9
58.6
45.5

Minor BPS
66.3
0.59
1.3
79.83
36.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14642965 - 14735367
92403

14642965 - 14735367
92403