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Intron Name: Anas_platyrhynchos_platyrhynchos_9_14760143_14836284_F

Intron Information:

Intron Rank:

140940

Intron Class:

major

Intron Phase:

Intron Coordinates:

14760143 - 14836284

Intron Length:

76142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

ATAGGCCTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

83.9

0.76

0.9

81.2

36.5

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

44.5

-0.5

2.1

51.11

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039247

14759910 - 14844242

84333