Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14976057_14976344_F

Intron Information:

Intron Rank:

150498

Intron Class:

major

Intron Phase:

Intron Coordinates:

14976057 - 14976344

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

ACAATTTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TGATAATCAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

71.2

0.53

72.3

32.8

Major PPT

72.8

0.51

0.9

66.1

39.9

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

49.8

0.07

73.08

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045898

14958777 - 14984770

25994