Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_14976516_14984617_F

Intron Information:

Intron Rank:

150499

Intron Class:

major

Intron Phase:

Intron Coordinates:

14976516 - 14984617

Intron Length:

8102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTATT

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAGTTTTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

85.6

30.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.3

0.82

0.7

80.5

Minor 5ss

50.8

0.03

2.5

73.1

36.3

Minor BPS

65.3

0.56

1.4

77.45

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030884

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045898

14958777 - 14984770

25994