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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15035394_15051775_F

Intron Information:

Intron Rank:

143337

Intron Class:

major

Intron Phase:

Intron Coordinates:

15035394 - 15051775

Intron Length:

16382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

ACTTTTGTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

85.1

0.79

0.8

82.1

34.6

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

45.7

-0.2

2.1

64.47

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026389

15035124 - 15092559

57436