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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15252791_15254254_R

Intron Information:

Intron Rank:

131890

Intron Class:

major

Intron Phase:

Intron Coordinates:

15252791 - 15254254

Intron Length:

1464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATTTTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

88.8

0.87

0.6

84.7

23.2

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

0.77

1.1

82.75

32.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040350

15250315 - 15270499

20185

ENSAPLT00000024290

15252263 - 15259499

7237