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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15254362_15262577_R

Intron Information:

Intron Rank:

131896

Intron Class:

major

Intron Phase:

Intron Coordinates:

15254362 - 15262577

Intron Length:

8216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGCTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

GAATAAGTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

63.2

39.7

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

38.1

-1.3

3.1

46.9

48.5

Minor BPS

40.2

-0.6

2.2

55.66

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040350

15250315 - 15270499

20185