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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15358834_15362037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15358834 - 15362037

Intron Length:

3204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TCTTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

TGTTGGTGAAAT

Flanking Amino Acid:

TLEAVVHMNQEEIRFCFHGL

Intron Amino Acid Position:

897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

0.83

0.8

83.9

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

-0.3

2.5

71.05

45.2

Associated Gene:

Gene:

EPHA4

Ensembl Gene ID:

ENSAPLG00000009611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040229

15357665 - 15451860

94196

ENSAPLT00000028209

15358118 - 15451860

93743