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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15370133_15370675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15370133 - 15370675

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

TCCCCATCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CTTTCCCCATCC

Flanking Amino Acid:

ENGSLDAFLRKNDGRFTVIQ

Intron Amino Acid Position:

713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

72.3

39.5

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

71.3

0.48

0.8

65.2

29.2

Minor 5ss

32.5

-2

3.5

39.8

46.2

Minor BPS

48.5

-0.1

2.1

67.45

43.9

Associated Gene:

Gene:

EPHA4

Ensembl Gene ID:

ENSAPLG00000009611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031630

15358665 - 15451860

93196

ENSAPLT00000047678

15361636 - 15451860

90225

ENSAPLT00000028209

15358118 - 15451860

93743

ENSAPLT00000045983

15361636 - 15451860

90225

ENSAPLT00000010144

15361636 - 15451860

90225

ENSAPLT00000040229

15357665 - 15451860

94196

ENSAPLT00000039729

15361636 - 15451860

90225