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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15416663_15447308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15416663 - 15447308

Intron Length:

30646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TGTTCCTCCATG

Flanking Amino Acid:

GYEERNGECQACKIGYYKAL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

74.6

0.55

0.8

70.4

29.5

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

52.6

-0

2.1

64.4

43.7

Associated Gene:

Gene:

EPHA4

Ensembl Gene ID:

ENSAPLG00000009611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040229

15357665 - 15451860

94196

ENSAPLT00000039729

15361636 - 15451860

90225

ENSAPLT00000031630

15358665 - 15451860

93196

ENSAPLT00000047678

15361636 - 15451860

90225

ENSAPLT00000010144

15361636 - 15451860

90225

ENSAPLT00000045983

15361636 - 15451860

90225