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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1556013_1559778_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1556013 - 1559778

Intron Length:

3766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACAGAG

5'SS Class:

major

3'SS Sequence:

CCTCAAAGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

CTTCCCTCAAAG

Flanking Amino Acid:

VADLFQAVPEEKGKERKVTN

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

62.1

38.7

Major BPS

79.4

0.73

80.1

Major PPT

46.5

-0.2

1.2

41.8

36.1

Minor 5ss

29.9

-2.3

3.3

37.5

47.2

Minor BPS

55.7

0.04

1.8

62.81

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027065

1555036 - 1559838

4803