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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15617417_15629505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15617417 - 15629505

Intron Length:

12089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTATTTTAACT

Flanking Amino Acid:

PAIGNGLSPQVMGLLTNHGG

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

75.3

40.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.8

83.2

Minor 5ss

32.3

-2

2.8

43.1

43.7

Minor BPS

74.3

0.84

1.2

85.02

35.1

Associated Gene:

Gene:

PAX3

Ensembl Gene ID:

ENSAPLG00000011062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011510

15616607 - 15692318

75712