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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15641890_15689629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15641890 - 15689629

Intron Length:

47740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACACCCG

5'SS Class:

major

3'SS Sequence:

AATTTCTTTTGAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

HSIDGILSERASAPQSDEGS

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

50.7

45.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

62.6

0.28

1.7

74.1

40.6

Minor 5ss

36.5

-1.5

3.3

48.5

47.2

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

PAX3

Ensembl Gene ID:

ENSAPLG00000011062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011510

15616607 - 15692318

75712