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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15691715_15692233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15691715 - 15692233

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTTT

U12 Branch Point Sequence:

CCCTCCTTTTCT

Flanking Amino Acid:

NYPRSGFPLEVSTPLGQGRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

31.2

-1.1

4.2

53.6

43.8

Major PPT

79.8

0.67

0.7

72.4

32.3

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

42.5

-0.5

3.6

67.36

49.2

Associated Gene:

Gene:

PAX3

Ensembl Gene ID:

ENSAPLG00000011062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011510

15616607 - 15692318

75712