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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15735083_15739923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15735083 - 15739923

Intron Length:

4841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

GATCTCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AGCTTTTGAACC

Flanking Amino Acid:

RLYTGMHTVLDVIGGALISA

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

55.8

43.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.65

0.9

69.5

41.3

Minor 5ss

32.9

-1.9

38.8

40.9

Minor BPS

56.8

0.19

1.4

61.74

37.6

Associated Gene:

Gene:

SGPP2

Ensembl Gene ID:

ENSAPLG00000010903

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011357

15718852 - 15740463

21612