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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15780985_15790367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15780985 - 15790367

Intron Length:

9383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAACAGCC

5'SS Class:

major

3'SS Sequence:

TTTCCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GTTGTGATATCT

Flanking Amino Acid:

LQWIFSFLLLAQFCCGFFVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

42.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

92.2

0.95

0.6

88.1

21.7

Minor 5ss

36.8

-1.5

3.3

43.4

43.9

Minor BPS

41.5

-0.5

2.4

64.82

45.6

Associated Gene:

Gene:

MOGAT1

Ensembl Gene ID:

ENSAPLG00000010112

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010541

15780155 - 15800172

20018