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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15791185_15793925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15791185 - 15793925

Intron Length:

2741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGGAAT

U12 Branch Point Sequence:

TTGCTCCTAAAG

Flanking Amino Acid:

PFFREYIMSAGMVSASKESV

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

48.7

-0

1.5

57.6

45.8

Major PPT

71.9

0.49

71.8

33.3

Minor 5ss

33.8

-1.8

38.1

42.1

Minor BPS

49.1

-0.2

1.8

58.69

42.6

Associated Gene:

Gene:

MOGAT1

Ensembl Gene ID:

ENSAPLG00000010112

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010541

15780155 - 15800172

20018