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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15859362_15859950_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15859362 - 15859950

Intron Length:
589

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTACGTACC

5'SS Class:
major

3'SS Sequence:
AATTTTTTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTAAA

U12 Branch Point Sequence:
ATTTCCTAAAAT

Flanking Amino Acid:
TGMAERIPNLGEKDIYIGYL

Intron Amino Acid Position:
310

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
69.9
40.9

Major BPS
72.7
0.57
1
72.1
31.1

Major PPT
86.4
0.82
0.8
80.6
36

Minor 5ss
35.5
-1.6
2.8
38.3
39.6

Minor BPS
70.8
0.73
1.7
87.9
37

Associated Gene:

Gene:
ACSL3

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15839544 - 15873478
33935