Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_15863291_15864326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15863291 - 15864326

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

AAACTATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCTTCTAACT

Flanking Amino Acid:

CEIKLMNWEEGGYYNTDKPY

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.5

0.48

66.9

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

58.8

0.36

1.7

77.41

39.2

Associated Gene:

Gene:

ACSL3

Ensembl Gene ID:

ENSAPLG00000009888

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010318

15839544 - 15873478

33935