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Intron Name: Anas_platyrhynchos_platyrhynchos_9_15902849_16089338_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15902849 - 16089338

Intron Length:

186490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CAAGAGGACTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

GTCTCTGCAAGA

Flanking Amino Acid:

WDTKTLGLRQHHCSPACAWA

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.3

32.5

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

48.2

-0.1

1.1

39.2

43.1

Minor 5ss

-0.8

58.3

46.6

Minor BPS

42.8

-0.5

2.3

55.58

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028771

15902639 - 16109319

206681