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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16096021_16098568_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

16096021 - 16098568

Intron Length:

2548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GACTGATGATCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GTTCTCTTGACT

Flanking Amino Acid:

HYFTSWASCLQYDYETRYAF

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

54.9

0.11

1.1

51.7

45.9

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

74.4

0.85

1.2

85.37

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028771

15902639 - 16109319

206681

ENSAPLT00000025868

16086173 - 16109319

23147

ENSAPLT00000009707

16085419 - 16109319

23901