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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16098720_16100082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16098720 - 16100082

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACTGT

5'SS Class:

major

3'SS Sequence:

TTTCTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAC

U12 Branch Point Sequence:

CTACCCAGAATC

Flanking Amino Acid:

NKMNFVKTYPAHQNRVSAII

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

68.2

39.6

Major BPS

47.7

-0.1

51.4

28.5

Major PPT

85.2

0.79

0.7

80.5

Minor 5ss

39.5

-1.2

3.2

55.9

48.3

Minor BPS

48.3

-0.1

1.7

58.96

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028771

15902639 - 16109319

206681

ENSAPLT00000025868

16086173 - 16109319

23147

ENSAPLT00000009707

16085419 - 16109319

23901