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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16123002_16124101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16123002 - 16124101

Intron Length:

1100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GCGTACTCAGTC

Flanking Amino Acid:

INQWVKNETRGMIDQVVAPD

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

86.3

0.82

0.7

85.6

29.2

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

43.6

-0.5

1.9

48.3

41.7

Associated Gene:

Gene:

SERPINE2

Ensembl Gene ID:

ENSAPLG00000008646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026868

16116606 - 16184479

67874

ENSAPLT00000046969

16116606 - 16127103

10498

ENSAPLT00000018458

16116606 - 16136305

19700

ENSAPLT00000042190

16116606 - 16129072

12467

ENSAPLT00000009047

16116606 - 16127103

10498

ENSAPLT00000035442

16116606 - 16127103

10498

ENSAPLT00000027499

16116606 - 16149602

32997