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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16125627_16126091_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
16125627 - 16126091

Intron Length:
465

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTGCG

5'SS Class:
strong_major

3'SS Sequence:
TAATGCAATTTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTATCTTTAGCT

Flanking Amino Acid:
SVNGIGSTPKAAGSKEESQH

Intron Amino Acid Position:
93

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.1
1.04
0.8
78.8
35.5

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
60.6
0.24
1
57
43

Minor 5ss
33
-1.9
3.1
41.3
45.2

Minor BPS
74.9
0.86
1.5
88.91
35.8

Associated Gene:

Gene:
SERPINE2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16116606 - 16127103
10498