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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16126113_16126827_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
16126113 - 16126827

Intron Length:
715

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTCAGTGAT

5'SS Class:
major

3'SS Sequence:
GCCTTCCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAACAT

U12 Branch Point Sequence:
AACATCTTAGTG

Flanking Amino Acid:
LTTMMRYSVNGIGSTPKGVG

Intron Amino Acid Position:
86

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1.3
74.1
36.5

Major BPS
71
0.52
1.1
77.7
35.3

Major PPT
78.4
0.64
0.8
69
37.1

Minor 5ss
29.9
-2.3
3.1
37.8
41.1

Minor BPS
47.6
-0.3
1.6
47.16
40.2

Associated Gene:

Gene:
SERPINE2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16116606 - 16127103
10498

16116606 - 16127103
10498