Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_16127104_16184445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16127104 - 16184445

Intron Length:

57342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAC

U12 Branch Point Sequence:

GTTTTCTTACAG

Flanking Amino Acid:

KTETKQLDAPGYSTPEIMNW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

65.1

0.38

39.5

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

57.3

0.09

1.8

64.96

42.7

Associated Gene:

Gene:

SERPINE2

Ensembl Gene ID:

ENSAPLG00000008646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026868

16116606 - 16184479

67874