Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_16211129_16211818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16211129 - 16211818

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTACATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGTTTTTGATCT

Flanking Amino Acid:

KMQHNVLVAEVTQQLKARFL

Intron Amino Acid Position:

735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.9

43.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.4

0.62

0.8

74.8

34.4

Minor 5ss

46.4

-0.4

3.1

64.2

47.3

Minor BPS

56.9

0.29

1.7

77.04

39.6

Associated Gene:

Gene:

CUL3

Ensembl Gene ID:

ENSAPLG00000008361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025740

16210997 - 16257175

46179

ENSAPLT00000008732

16210997 - 16257527

46531

ENSAPLT00000034917

16210692 - 16263692

53001