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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16275918_16278082_R

Intron Information:

Intron Rank:

139154

Intron Class:

major

Intron Phase:

Intron Coordinates:

16275918 - 16278082

Intron Length:

2165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGATAAA

5'SS Class:

major

3'SS Sequence:

CTCCTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

GTCTGAGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

72.6

33.8

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

27.6

-2.6

2.9

32.2

42.5

Minor BPS

43.5

-0.4

2.5

65.31

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036286

16275536 - 16278232

2697