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Intron Name: Anas_platyrhynchos_platyrhynchos_9_16286848_16286934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16286848 - 16286934

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTAA

5'SS Class:

major

3'SS Sequence:

TTTATTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTATTTCAACA

Flanking Amino Acid:

KQSETQLNNEDPEKAKYTIR

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.8

30.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

81.3

0.7

0.9

77.8

35.2

Minor 5ss

45.7

-0.5

2.5

58.1

46.4

Minor BPS

64.1

0.44

1.5

75.89

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008372

16282819 - 16300658

17840

ENSAPLT00000043468

16283074 - 16301658

18585